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Bioinformatics Articles & Analysis: Older

87 articles found

Best Practices for Bioinformatics Analysis of 16S rRNA Sequencing via NGS

Best Practices for Bioinformatics Analysis of 16S rRNA Sequencing via NGS

This article outlines best practices for the bioinformatics analysis of 16S rRNA sequencing, emphasizing the critical stages of data preprocessing and quantification. Bioinformatics Pipeline Overview The bioinformatics pipeline for 16S rRNA sequencing can be broadly divided into two main stages: data preprocessing and quantification. ...

ByCD Genomics


Exploring the Landscape of MicroRNA Targeting through Degradome Sequencing

Exploring the Landscape of MicroRNA Targeting through Degradome Sequencing

Degradome sequencing, also known as parallel analysis of RNA ends (PARE) sequencing, is a cutting-edge technique that leverages high-throughput sequencing and bioinformatics to investigate the degradation products of mRNA. This method is particularly valuable for identifying the target genes regulated by microRNAs (miRNAs), which are small, endogenous non-coding RNAs ...

ByCD Genomics


Glycosylation Site Detection

Glycosylation Site Detection

These technologies can simultaneously analyze thousands to millions of protein samples, significantly improving the efficiency and accuracy of research. Bioinformatics plays an important role in glycosylation research. By using algorithms and software, scientists can predict glycosylation sites and analyze and interpret a large amount of experimental data.1. ...

ByMtoZ Biolabs


Sequencing Depth, Coverage and Read Types for NGS   

Sequencing Depth, Coverage and Read Types for NGS  

The detailed point is to sequence the unknown genome sequence, and use bioinformatics analysis means to splice and assemble the sequence, so as to obtain the map of its genome. ...

ByCD Genomics


How to Submit Sequence Data to GenBank   

How to Submit Sequence Data to GenBank  

If there are any problem involved, the annotator will contact the submitter by email for correction. CD Genomics has a team of bioinformatics professionals who deal with quality control of raw reads, sequence alignment, genome assembly, genome mining, and comparative genomic studies. ...

ByCD Genomics


Advancements in Sequencing Technologies: Transforming Pathogen Detection and Clinical Diagnostic   

Advancements in Sequencing Technologies: Transforming Pathogen Detection and Clinical Diagnostic  

Navigating the Path from Wet Lab to Dry Lab The high-throughput sequencing of pathogens necessitates a two-fold process: wet lab experimentation and subsequent bioinformatics analysis. Wet lab endeavors encompass sample pretreatment, nucleic acid extraction, library construction, and ultimately, sequencing. Meanwhile, dry lab bioinformatics analysis encompasses ...

ByCD Genomics


Exploring How RNC-RNA Sequencing Illuminates Translational Dynamics and Molecular Mechanisms   

Exploring How RNC-RNA Sequencing Illuminates Translational Dynamics and Molecular Mechanisms  

Meanwhile, it's a useful tool for studying disease occurrence and progression, pharmacological action, bio-developmental molecular mechanisms, and more. Workflow and Bioinformatic Analysis Pipelines of RNC-mRNA Sequencing There are four major steps in the RNC-mRNA sequencing workflow: (1) sample preparation, (2) library preparation, (3) sequencing, and (4) data analysis. ...

ByCD Genomics


Clonality Analysis Service: A Paradigm Shift in Disease Diagnosis and Treatment

Clonality Analysis Service: A Paradigm Shift in Disease Diagnosis and Treatment

These providers leverage state-of-the-art molecular biology techniques and bioinformatics tools to deliver clonality analysis services tailored to client needs. ...

ByCreative Bioarray


T Cell Antigen Receptor Sequencing

T Cell Antigen Receptor Sequencing

This technology identifies the diversity and specificity of T cells by measuring the sequences of the rearrangement regions of the TCRβ chain or α chain genes.(1) Sample Preparation: Total RNA or DNA is extracted from blood, tissue, or other samples enriched with immune cells.(2) Amplification: PCR amplification is performed using specific primers for multiple regions of the TCR genes, increasing ...

ByMtoZ Biolabs


Qualitative Detection of Recombinant Human Collagen Protein

Qualitative Detection of Recombinant Human Collagen Protein

It can be used to confirm the amino acid sequence of recombinant collagen, providing detailed molecular information on the protein, including molecular weight and potential modifications.With the progression of technology, more advanced analytical techniques, such as protein chips, high-throughput sequencing, and bioinformatics analysis, are gradually being applied to the ...

ByMtoZ Biolabs


The Process of Discovering New Antibodies by Using Sequencing

The Process of Discovering New Antibodies by Using Sequencing

The result of the sequencing is a set of base combinations of the antibody sequence.Data AnalysisThe sequencing results are input into a computer, and data analysis is performed through bioinformatics software to identify the antibody sequence with immune activity.Experimental VerificationThe identified antibody sequence is validated in the laboratory, such as by cloning and ...

ByMtoZ Biolabs


Sequencing of Proteins, Peptides, and Antibodies in Biomedicine

Sequencing of Proteins, Peptides, and Antibodies in Biomedicine

You only need to tell us the purpose of the experiment and send the samples, MtoZ Biolabs provides one-stop services including protein extraction, protein enzymatic hydrolysis, peptide enrichment, peptide separation, mass spectrometry analysis, mass spectrometry raw data analysis, bioinformatics analysis, Free project evaluation!Sequencing of Proteins, Peptides, and Antibodies in ...

ByMtoZ Biolabs


Antibody Sequencing: Insights for Drug Design

Antibody Sequencing: Insights for Drug Design

The company has established a new generation of antibody sequencing platform based on the high-resolution mass spectrometer Orbitrap Fusion Lumos, combined with rich bioinformatics analysis experience. This platform can quickly and accurately analyze the sequences of different subtypes (such as IgG, IgM) and types (such as fluorescently labeled, immobilized antibodies, and ...

ByMtoZ Biolabs


What are the Protein Protein Interaction Databases?

What are the Protein Protein Interaction Databases?

It contains experimentally validated interactions.IntActIntAct is an open-source protein interaction database maintained by the European Bioinformatics Institute (EBI). It provides detailed protein interaction information, including experimental conditions and methods.MINTMolecular Interactions Database, focusing on experimentally validated protein interactions.STRING(Search Tool ...

ByMtoZ Biolabs


Alfa Cytology Announces Pancreatic Cancer Vaccine Development Services to Explore Reliable Immunotherapy in Preclinical Trails

Alfa Cytology Announces Pancreatic Cancer Vaccine Development Services to Explore Reliable Immunotherapy in Preclinical Trails

Alfa Cytology, a biotech company composed of scientists, bioinformatics, and oncologists, has recently announced its pancreatic cancer vaccine development services to provide further strategies for cancer therapy research. ...

ByAlfa Cytology


Analysis of Antibody Constant Region Sequence

Analysis of Antibody Constant Region Sequence

Molecular Modeling and Structural PredictionBased on sequence information, computational tools can be used to predict the three-dimensional structure of the constant region to understand its possible spatial structure and functional relationship.3. Bioinformatics ToolsSpecial bioinformatics tools (such as IMGT, IgBLAST, etc.) are used for detailed analysis and ...

ByMtoZ Biolabs


Variant Analysis Workflow in Bioinformatics   

Variant Analysis Workflow in Bioinformatics  

It makes use of read mappers, read aligners, variant callers, and everything else. About CD Genomics Bioinformatics Analysis The bioinformatics analysis department of CD Genomics provides novel solutions for data-driven innovation aimed at discovering the hidden potential in biological data, tapping new insights related to life science research, and predicting ...

ByCD Genomics


Drug Discovery: Unraveling the Mysteries of Therapeutic Agents

Drug Discovery: Unraveling the Mysteries of Therapeutic Agents

Advanced computational techniques, such as bioinformatics and systems biology, have played a pivotal role in this endeavor, enabling the rapid screening and prioritization of potential drug targets. ...

ByCD ComputaBio


Unraveling the Complexity of Glycans: Exploring Glycan Arrays and Their Applications

Unraveling the Complexity of Glycans: Exploring Glycan Arrays and Their Applications

Analyzing the vast amount of data generated from glycan array experiments requires sophisticated computational tools and bioinformatics approaches. Researchers are developing algorithms and databases to aid in the interpretation and integration of glycan array data, facilitating the discovery of new glycan-protein interactions and their functional significance. ...

ByCD BioGlyco.


CD Genomics Takes Genomic Research to New Heights with Ribo-seq Technology

CD Genomics Takes Genomic Research to New Heights with Ribo-seq Technology

About CD Genomics CD Genomics stands as a premier provider of genomics services, specializing in sequencing and bioinformatics. With an unwavering dedication to quality, innovation, and customer satisfaction, CD Genomics serves researchers worldwide as they pursue groundbreaking discoveries. ...

ByCD Genomics

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